CDS
| Accession Number | TCMCG048C02738 |
| gbkey | CDS |
| Protein Id | XP_031248266.1 |
| Location | complement(join(1000078..1000138,1000523..1000591,1000700..1000816,1001059..1001171,1001296..1001370,1001477..1001602,1002223..1003127,1003211..1003267,1003875..1004396,1005356..1005533,1005646..1005789,1005878..1005952,1007106..1007176,1007666..1007768,1007860..1008086,1008404)) |
| Gene | LOC116106033 |
| GeneID | 116106033 |
| Organism | Pistacia vera |
Protein
| Length | 947aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA578116 |
| db_source | XM_031392406.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X3 [Pistacia vera] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGTGCGCACTCTTGCTGGACATAGATCCAATTGCTCTTCTGTTCAATTTCATCCATTTGGGGAATTCTTTGCTTCTGGGTCCATGGACACAAATTTAAGGATTTGGGATATCAGGAAGAAAGGATGTATTCACACATACAAGGGTCATACTCGAGGCATTAGTACTATCAGATTCACTCCTGATGGTCGCTGGGTAGTGTCTGGTGGATTTGATAATGTAGTAAAGGTGTGGGATCTTACTGCTGGAAAACTCTTGCATGACTTTAAGTTTCATGAAGGGCAAATTAGATCTATAGACTTCCATCCTCTTGAGTTTCTCCTGGCAACAGGTTCAGCAGACAGAACTGTGAAATTCTGGGATTTGGAAACCTTTGAACTGATTGGATCTTCCAGACCTGAGACTACTGGAGTTCGCTCAATTACCTTTCATCCTGATGGGAGGACCCTGTTTTGTGGTTTGGATGATAGTTTGAAGGTCTATTCATGGGAGCCAGTTTTATGTCACGATGCTGTTGATATGGGATGGTCAACACTTGGTGATCTCTGCATTAATGATGGAAAGCTTTTGGGATGTTCCTTCTATCAAAATTCTGTTGGAGTTTGGGTAGCAGATGTTTCGCATATTGAGCCATATGGACCTGGTGTACCTGAGCAAAATGACTGCACAGAGAAGAAAATTAATTCCCCAGGAACTCATTCTTCGGAGAAAGTAGGGAGTGGCATTAGATCCACTTCCAGTTTGCGCTGCAGGTCTCCTGATTATGACACAAAGGGGATAAAGACCATATATGTGGACTCTACTGGTGGAAAACCTGTAACTTCTCAGAAAGTGGGGTCTTTGGACTCTCCAAAAATTGTACTCCCTGTGGATACCAAGGAAATCACTGATCTCAAAACAGAGAAGCAGAATCCTGCAATAGATTCGCTGGCAAAATCTAATGCGCAAGCACTTATTAAATCTTTTGTTGTTCCTAGTATTGTACCTCGTGAGGGTCCTGCTGGGAAAGACTCTTCCAATTCTGGCAGAGAATCTATTACCTTTTGTAAGACAAAACCTGGTATGCTGCTCCGGCCAGCTCATGTACGAAGGCCATCAGTTAGCAAGATTGAAGCTGAAAAGGCGTCTACACCTGTTGAATCTGGAAGTTTCAGAAGCATGAAGGGTGATATGGACAGTGCAAAGGATCCAAACTTCCAAACTCAGCTTGTATTATCAGATGGAGGTAGAAAATCCTTTGAAAATGACTCTGATATCAAGAACTGTACAGAGAAGATTCAAAAAGCTGTCTCTCTGCAAGGACCTTTGAATCAAGAAAACCGTGATGAGTCCCTTAATCACAGCAAAGAAACTCACGCTGTTAAATATGTCAATGGAGTTGCAGTTGTACGGGGAAGGACACGCTCTCTGGTAGAGAGGTTTGAAAAAAGAAAGGGATTTAATACTAATGACAATCAAGCAATTAATAGCAATCCTCAGAGGACAGTTAGTAGCAATGAAGACCAATCAACAATTATCACACCTAGCACGAGACTCAGTAGCAATGAAGATCAAGCAACTAAGGTTACCCCTCAAATGAGAATTGATAGCAATGCAGATCAAACAACTAACACTATCACTCATGTGAAATTTCAAAACAATGAAGGTCAAGCAAATAATACTACCTCTCCTGTGAGATTTAAGAACAGTGAAGATCAAGCCACTAGTACTACCCCTCCAGTGAGATTTACGAACAGTGAAGATCGAACGACTAATGCTGCCCCTCCAGCGAGATTGAAGAGCAGTGAAGATCGAACAACTAATACTACCCCTCCTGGGAGATTTATGGACAGTGAAGATCGAGTGACTAATGCTACCCCTCCTGGGAGATTTATGAACAGTGAAGATCGAACGACTAATACTACTCCTCCTGGGAGATTTAAGAACAGTGAAGATCAAGTGGCTCGTACTACCCCACCTGGGAGATTTAAGAACAGTGAAGTTCAAGTGGCTGGTACTACCCCCCCTGCGAGATTCAAGAAAAGTGAAAATCAAGCAACTAATACTACCCCTCCTGTGAGATTTAAGAAAAGTGAAGATCAACCAACTAAGGCTATCCCTCGTATGAGATTTAAGAACAATGTAGATCAACCAACTAATACAACTCCTTACATGAGATTTAAGAACAATGACGAGAAGGCAACTAATGCTGCTCCTCATGTGAGATACAAGAACAATGGAGAGCAAGCAACTATTCTAAGCTCTCACAGGATGGTTGAAGCTGACGAAAGACCCACCATTCTGAGTCGAGAACCGCAAATTCCAGGAAGGGATACAACCTCTGCAAATGATGGGGAAGTTATTGAAAATTTGATGCAAACTCATGATGTATTCATAAGTACTCTTCGGTCTCGCTTGACCAAATTACAGGTGGTTCGACATTTTTGGGAAAGAAATGACGTTAAAGGTGCTATTGGTGCCATGATGAAGCTGCCAGATCATTCTGTGCAAGCTGATACTATCAGTATCCTGATGGAGAAAATGGAGACTCTCAACTTAGATTTATTTTTGTGCTTGCTTCCTGTGCTTGTGGGTTTACTGGACAGCAAGATGGAAAGGCATGCAAGCATCTCATTGGAGATGCTTCTGAAGCTTGTAGCAGTATTTGGTCCAATGATACACTCAACCGTTTCAGCACCTCCCGCTGTAGGTGTTGATCTTCACTTAGAGCAAAGGCGAGAATGCTGCAAGCAATGTTTTGTACATCTTCAGAAGGTCCAGAAAATTCTTCCAGATCTTGTAAGGAGGGGTGGTTTGCTGGCAAAATGTGCTTCAGAATTGAATTTAATTCTTCAAGAATCATAG |
| Protein: MVRTLAGHRSNCSSVQFHPFGEFFASGSMDTNLRIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGQIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSSRPETTGVRSITFHPDGRTLFCGLDDSLKVYSWEPVLCHDAVDMGWSTLGDLCINDGKLLGCSFYQNSVGVWVADVSHIEPYGPGVPEQNDCTEKKINSPGTHSSEKVGSGIRSTSSLRCRSPDYDTKGIKTIYVDSTGGKPVTSQKVGSLDSPKIVLPVDTKEITDLKTEKQNPAIDSLAKSNAQALIKSFVVPSIVPREGPAGKDSSNSGRESITFCKTKPGMLLRPAHVRRPSVSKIEAEKASTPVESGSFRSMKGDMDSAKDPNFQTQLVLSDGGRKSFENDSDIKNCTEKIQKAVSLQGPLNQENRDESLNHSKETHAVKYVNGVAVVRGRTRSLVERFEKRKGFNTNDNQAINSNPQRTVSSNEDQSTIITPSTRLSSNEDQATKVTPQMRIDSNADQTTNTITHVKFQNNEGQANNTTSPVRFKNSEDQATSTTPPVRFTNSEDRTTNAAPPARLKSSEDRTTNTTPPGRFMDSEDRVTNATPPGRFMNSEDRTTNTTPPGRFKNSEDQVARTTPPGRFKNSEVQVAGTTPPARFKKSENQATNTTPPVRFKKSEDQPTKAIPRMRFKNNVDQPTNTTPYMRFKNNDEKATNAAPHVRYKNNGEQATILSSHRMVEADERPTILSREPQIPGRDTTSANDGEVIENLMQTHDVFISTLRSRLTKLQVVRHFWERNDVKGAIGAMMKLPDHSVQADTISILMEKMETLNLDLFLCLLPVLVGLLDSKMERHASISLEMLLKLVAVFGPMIHSTVSAPPAVGVDLHLEQRRECCKQCFVHLQKVQKILPDLVRRGGLLAKCASELNLILQES |